BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB030A06SP1|AL429149
(981 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1806 1533 0.0
>3x_Contig1806
Length = 53694
Score = 1533 bits (751), Expect = 0.0
Identities = 873/941 (92%), Gaps = 1/941 (0%)
Strand = Plus / Plus
Query: 19 tgccaatcctatcagcggggsgtcaackccgtgagggggggtatcgcaaatacacagggc 78
||||||||||||||||||| |||||| |||| ||| || ||| |||||||||||||| |
Sbjct: 5901 tgccaatcctatcagcgggtcgtcaactccgttaggtggtgtaccgcaaatacacaggtc 5960
Query: 79 agtgtctctgagggrgactttgggratacaaagaactcaatctccattccataacgckcc 138
||| ||||||| || |||||||| |||||||||||||||||||||||||||||||| ||
Sbjct: 5961 agtttctctgatggatactttgggaatacaaagaactcaatctccattccataacgctcc 6020
Query: 139 tgggratgattctccaagcattttttctcagcrgasttctattcattgggacatgaattc 198
|||| ||||||||||||||||||||||||||| || ||||||||||||| ||||||||||
Sbjct: 6021 tgggaatgattctccaagcattttttctcagcagacttctattcattggaacatgaattc 6080
Query: 199 cggggksratackggsgggggggggakaccgttcaacgckgcggggsskggraatgggrg 258
|||| |||| || || |||| || |||||||||||| || ||| || ||||||
Sbjct: 6081 cgggatcaatactggcggtggggagataccgttcaacgctgctgggcctggaaatgggat 6140
Query: 259 ggsrgcggggrcsgggrckggggagattcatactccaatatcccgtccacctggsattat 318
|| || ||| | ||| | || || ||||||||||||||||||||||||||||| |||||
Sbjct: 6141 ggcagcagggaccgggactggtgatattcatactccaatatcccgtccacctggcattat 6200
Query: 319 tacgaacgtgcagcraacttcgtggsagtgcttggrccattcaaatcaagttcaagggcg 378
|||||||||||||| |||||||||| ||| ||||| |||||||||||||||||||||||
Sbjct: 6201 tacgaacgtgcagcaaacttcgtggcagtacttggaccattcaaatcaagttcaagggcc 6260
Query: 379 tttcgattctgarataatggrkcaatggtataatgckgggtttttcaacgaatctttgca 438
|||||||||||| ||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 6261 tttcgattctgaaataatggatcaatggtataatgctgggtttttcaacgaatctttgca 6320
Query: 439 tttaatgcctatgaatagtgatgakccctttcatttttctggtsgctttatcatgttcaa 498
|||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||
Sbjct: 6321 tttaatgcctatgaatagtgatgatccctttcatttttctggtcgctttatcatgttcaa 6380
Query: 499 tgatttattatcaaagaccggggkcatcaatccattccatgcgtttgatatgatttgttt 558
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 6381 tgatttattatcaaagaccgggatcatcaatccattccatgcgtttgatatgatttgttt 6440
Query: 559 caaccatgcactcgcttctgcggcggcgccatcaaataatatgatgaactttggcsaaaa 618
||||||||||||||||||||| || |||||||||||||||||||||||||||||| ||||
Sbjct: 6441 caaccatgcactcgcttctgctgctgcgccatcaaataatatgatgaactttggccaaaa 6500
Query: 619 ggggagtggcacttccctgatgcagcagcatgtattgggccaatcgcaggcvcatcctgc 678
||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 6501 ggggagtagcacttccctgatgcagcagcatgtattgggccaatcgcaggcccatcctgc 6560
Query: 679 caatctgtctcaaagacaacccaagccattcgatcttcctgcatctaatactacgataag 738
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6561 caatctgtctcaaagacaacccaagccattcgatcttcctgcatctaatactacgataag 6620
Query: 739 ctcttcgtccactactccagtgccagtattacagaatatgatatctaaagggttgcactt 798
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6621 ctcttcgtccactactccagtgccagtattacagaatatgatatctaaagggttgcactt 6680
Query: 799 cgacaataatacctatgcgaatattgacaggracttccaatctccagatttatcccattc 858
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 6681 cgacaataatacctatgcgaatattgacaggaacttccaatctccagatttatcccattc 6740
Query: 859 tcaaattttgcagttgaaaaatgaggrcggstcttactaccagaacactacagtttccgt 918
|||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 6741 tcaaattttgcagttgaaaaatgaggacggctcttactaccagaacactacagtttccgt 6800
Query: 919 accgtttt-caaacacgtacaggsagttgattcttttgaat 958
|||||||| |||||||||||||| |||||||||||||||||
Sbjct: 6801 accgttttccaaacacgtacaggcagttgattcttttgaat 6841
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.42 0.717 1.34
Gapped
Lambda K H
1.42 0.717 1.34
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4867
Number of Sequences: 1807
Number of extensions: 4867
Number of successful extensions: 108
Number of sequences better than 1.0e-20: 1
length of query: 981
length of database: 10,358,551
effective HSP length: 16
effective length of query: 965
effective length of database: 10,329,639
effective search space: 9968101635
effective search space used: 9968101635
T: 0
A: 40
X1: 5 (10.2 bits)
X2: 14 (28.6 bits)
S1: 12 (25.0 bits)
S2: 49 (100.5 bits)